Chuiqin/irgsea
WebA list after perform irGSEA.integrate. method: A character. It should be one of the followling : AUCell, UCell, singscore, ssgsea or RRA. Default RRA. upset.width: Width of the whole upset plot. Default 13. upset.height: ... Developed by Chuiqin Fan. Site built with ... WebReleases · chuiqin/irGSEA. irGSEA 1.1.3. 08 Apr 08:15 . chuiqin. V1 c42f07f. Compare. Choose a tag to compare. Could not load tags. Nothing to show {{ refName }} default. …
Chuiqin/irgsea
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WebJul 26, 2024 · In chuiqin/irGSEA: The integration of single cell rank-based gene set enrichment analysis. View source: R/plot.R. irGSEA.ridgeplot: R Documentation: Ridge plot Easy to show the data distribution by ridge plot Description. Ridge plot Easy to show the data distribution by ridge plot Usage WebJul 26, 2024 · chuiqin/irGSEA: The integration of single cell rank-based gene set enrichment analysis The integration of single cell rank-based gene set enrichment analysis. Meanwhile, you are easy to visualize the results. Getting started README.md Browse package contents Vignettes Man pages API and functions Files
WebirGSEA.score.Rd Input a Seurat object or scRNA-seq matrix, calculate the enrichment scores of AUCell, UCell, singscore and ssgsea. Then, return a Seurat object including … WebJul 26, 2024 · chuiqin/irGSEA irGSEA.integrate: Integrate differential gene set calculated by all enrichment... irGSEA.integrate: Integrate differential gene set calculated by all …
WebAug 22, 2024 · Introduction. Acute pancreatitis (AP) is a clinically common critical and acute disease that occurs in approximately 13 million people worldwide every year ().With the exacerbation of alcohol abuse and obesity worldwide, the morbidity of … WebJul 26, 2024 · chuiqin/irGSEA / irGSEA.halfvlnplot: Half vlnplot irGSEA.halfvlnplot: Half vlnplot In chuiqin/irGSEA: The integration of single cell rank-based gene set enrichment analysis View source: R/plot.R irGSEA.halfvlnplot R Documentation Half vlnplot Description Easy to show the data distribution by half vlnplot Usage
WebGitHub - chuiqin/irGSEA: The integration of single cell rank-based gene set enrichment analysis 当然学习的时候如果觉得好用,也别忘点亮一颗星星支持作者,这也是R语言开源的魅力,我们作为使用者对于好用的工具应该给予肯定和支持
WebAug 1, 2024 · chuiqin/irGSEA/) in R software was used. This package was. used to score individual cells using multiple gene set enrichment. methods and generate a multiple gene set enrichment score. matrix. phoenix to grand canyon skywalkWebGitHub - chuiqin/irGSEA: The integration of single cell rank-based gene set enrichment analysis 当然学习的时候如果觉得好用,也别忘点亮一颗星星支持作者,这也是R语言开源的魅力,我们作为使用者对于好用的工具应该给予肯定和支持 phoenix to hobby airportWebThe integration of single cell rank-based gene set enrichment analysis • irGSEA irGSEA Integrate all single cell rank-based gene set enrichment analysis and easy to visualize … how do you get flying in dragonflightWebJan 31, 2024 · Single cell RNA sequencing (scRNA-seq) provides a better understanding of cellular behavior in the context of complex tumor microenvironments by analyzing individual cell populations. Methods The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) data was employed to investigate the metabolic pathways in HCC. phoenix to horseshoe bend azWebIn chuiqin/irGSEA: The integration of single cell rank-based gene set enrichment analysis View source: R/main.R irGSEA.score R Documentation Calculate enrichment scores … phoenix to hermosillo flightsWebOct 23, 2024 · GSEA的输入文件是一个表达矩阵,我们需要提前把样本进行分组,然后对所有基因基于分组来进行排序,那么这个时候我们最常使用的排序方式就是通过LogFC的大小来进行排序(从大到小),这种排序天生就具有了一种属性即可以表示两组间基因的表达量变化趋势,排序之后的基因列表其顶部可以看作是上调的差异基因,其底部可以看作是下调 … phoenix to indianapolis mapWebJul 26, 2024 · chuiqin/irGSEA: The integration of single cell rank-based gene set enrichment analysis The integration of single cell rank-based gene set enrichment … how do you get floor plans for your house